Illumina MiSeq paired end sequencing of SAMD00089517 - SRA

DRX093042: Illumina MiSeq paired end sequencing of SAMD00089517
1 ILLUMINA (Illumina MiSeq) run: 827,277 spots, 439.3M bases, 281.7Mb downloads

Submitted by: TUM-MID

Study: Molecular characterization of IMP-1 producing Enterobacter cloacae complex isolates in multi tertiary care hospital in Tokyo, Japan

PRJDB6127 • DRP003752 • All experiments • All runs

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In this study, we investigated molecular epidemiological characteristic of IMP-1-producing E. cloacae complex from 3 hospitals in Tokyo, Japan between 2007 and 2011. Phylogenetic tree of core-genome SNPs analysis of IMP-1-producing E. hormaechei ST78 showed that these isolates spread not only as intrahospital outbreak but also as regional transmission in Tokyo.

Sample: IMP-1 producing Enterobacter hormaechei ST78 strain TUM11136

SAMD00089517 • DRS049051 • All experiments • All runs

Organism: Enterobacter hormaechei

Library:

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol:

Spot descriptor:

1 forward251 reverse

Runs: 1 run, 827,277 spots, 439.3M bases, 281.7Mb

Run	# of Spots	# of Bases	Size	Published
DRR099564	827,277	439.3M	281.7Mb	2017-08-16

ID:: 4386752

SRA

Sequence Read Archive

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